With the theories of system engineering to China's new energy industry to stop the overall design In China's new energy industries, emerging industry chain is not sound affects every industry development, there is no perfect equipment, technology, products, service, market, form, it is a kind of common phenomenon. Cars, refrigerators, color TV, computer and so on the industry, has a wide range of introducing foreign. New energy industry both at home and abroad is dependent on it's hard to find a reference, can the independent innovation, and must depend on the systemic innovation. With enterprise as the main body, set up independent knowledge property right at the center of the competitiveness, and the key technologies can be disciplined by others Set up the independent knowledge property rights center competitive power, not only in technology patents stop enclosure, but also in the brand, culture, network, such as professional set center competitiveness. In the development process, it is necessary to carry out the policy of "quality first" At present our country some new energy industry seems to present the "excess capacity" of the state, but serious analysis